Molossus molossus

Pallas's mastiff bat

Included in the VGP.

- S3 File Index -- S3 Interactive Viewer -- NCBI Taxonomy Browser -


Resource Primary Assembly Alternate Assembly
GenBank mMolMol1: GCA_014108415.1
ENA mMolMol1: GCA_014108415.1
UCSC Genome Browser mMolMol1: GCA_014108415.1

metadata.yaml (view) (edit on github)
species:
  short_name: mMolMol
  name: Molossus molossus
  taxon_id: 27622
  common_name: Pallas's mastiff bat
  order:
    name: Chiroptera
  family:
    name: Molossidae
  individuals:
    - short_name: mMolMol1
  genome_size: 2319008189
  genome_size_method: DAmar assembly 
  project: [ vgp ]
Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio CLR mMolMol1 135.08 Gbp 58.25x 235.1 GiB
10x mMolMol1 106.64 Gbp 45.98x 55.2 GiB
Bionano mMolMol1 N/A 408.78x 1.5 GiB
Arima mMolMol1 148.51 Gbp 64.04x 95.5 GiB
Bases and Coverage are approximate.
Coverage based on genome size 2.32 Gbp.
Last upload on 23 February 2020.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
mMolMol1 PacBio CLR 135.08 Gbp 58.25x 235.1 GiB
10x 106.64 Gbp 45.98x 55.2 GiB
Bionano N/A 408.78x 1.5 GiB
Arima 148.51 Gbp 64.04x 95.5 GiB
Bases and Coverage are approximate.
Coverage based on genome size 2.32 Gbp.
Last upload on 23 February 2020.
Assemblies
Individual 1 Primary Assembly
Version assembly_dresden_DAmar1.0 from 18 April 2019
mMolMol1.pri.asm.20190418.fasta.gz (722.5 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 3 62.58 Mbp 0 252.44 Mbp
20 7 49.87 Mbp 2 132.40 Mbp
30 12 34.19 Mbp 4 119.27 Mbp
40 20 26.92 Mbp 6 112.86 Mbp
50 30 21.66 Mbp 8 110.67 Mbp
60 41 18.67 Mbp 10 107.80 Mbp
70 58 10.97 Mbp 12 95.14 Mbp
80 87 5.75 Mbp 15 72.82 Mbp
90 147 2.55 Mbp 18 55.97 Mbp
100 0 59 28.36 Kbp
0.978x 409 2.27 Gbp 60 2.32 Gbp
NG based on genome size 2.32 Gbp.
Individual 1 Alternate Assembly
No assembly available.


Contigs Scaffolds
NG LG Len LG Len
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0.000x - 0.0 Mbp - 0.0 Mbp
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.