Myxine glutinosa
Atlantic hagfish
Included in the VGP.
- S3 File Index -- S3 Interactive Viewer -- NCBI Taxonomy Browser -
metadata.yaml (view) (edit on github) |
---|
No image
Raw Data by Technology
Datatype | Individual | Bases | Coverage | Bytes | Access |
---|---|---|---|---|---|
PacBio HiFi (.bam) | kmMyxGlut1 | 163.33 Gbp | 38.93x | 96.1 GiB | |
Arima | kmMyxGlut1 | 1738.48 Gbp | 414.35x | 552.6 GiB |
Bases and Coverage are approximate.
Coverage based on genome size 4.20 Gbp.
Last upload on 7 November 2023.
Coverage based on genome size 4.20 Gbp.
Last upload on 7 November 2023.
Raw Data by Individual
Individual | Datatype | Bases | Coverage | Bytes | Access |
---|---|---|---|---|---|
kmMyxGlut1 | PacBio HiFi (.bam) | 163.33 Gbp | 38.93x | 96.1 GiB | |
Arima | 1738.48 Gbp | 414.35x | 552.6 GiB |
Bases and Coverage are approximate.
Coverage based on genome size 4.20 Gbp.
Last upload on 7 November 2023.
Coverage based on genome size 4.20 Gbp.
Last upload on 7 November 2023.
Assemblies
Individual 1 Primary Assembly
Version assembly_cambridge from 14 November 2023
kmMyxGlut1.pri.asm.20231114.fasta.gz (756.1 MiB)
Quality: not computed
Version assembly_cambridge from 14 November 2023
kmMyxGlut1.pri.asm.20231114.fasta.gz (756.1 MiB)
Quality: not computed
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 199 | 1.62 Mbp | 2 | 261.19 Mbp |
20 | 508 | 1.17 Mbp | 3 | 207.85 Mbp |
30 | 920 | 0.89 Mbp | 6 | 168.68 Mbp |
40 | 1463 | 0.66 Mbp | 9 | 112.04 Mbp |
50 | 2225 | 461.00 Kbp | 13 | 83.84 Mbp |
60 | 3407 | 267.39 Kbp | 48 | 1.95 Mbp |
70 | 5991 | 91.48 Kbp | 1834 | 91.71 Kbp |
80 | 0 | 0 | ||
90 | 0 | 0 | ||
100 | 0 | 0 | ||
0.729x | 8396 | 3.06 Gbp | 4248 | 3.06 Gbp |
NG based on genome size 4.20 Gbp.
Individual 1 Alternate Assembly
Version assembly_cambridge from 14 November 2023
kmMyxGlut1.alt.asm.20231114.fasta.gz (630.2 MiB)
Quality: not computed
Version assembly_cambridge from 14 November 2023
kmMyxGlut1.alt.asm.20231114.fasta.gz (630.2 MiB)
Quality: not computed
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 708 | 419.95 Kbp | 708 | 419.95 Kbp |
20 | 1938 | 287.81 Kbp | 1938 | 287.81 Kbp |
30 | 3671 | 205.12 Kbp | 3671 | 205.12 Kbp |
40 | 6086 | 147.41 Kbp | 6086 | 147.41 Kbp |
50 | 9628 | 94.50 Kbp | 9628 | 94.50 Kbp |
60 | 15920 | 44.28 Kbp | 15920 | 44.28 Kbp |
70 | 0 | 0 | ||
80 | 0 | 0 | ||
90 | 0 | 0 | ||
100 | 0 | 0 | ||
0.656x | 24881 | 2.75 Gbp | 24881 | 2.75 Gbp |
NG based on genome size 4.20 Gbp.
Individual 1 Mitochondrial Assembly
Version assembly_MT_cambridge from 14 November 2023
kmMyxGlut1.MT.20231114.fasta.gz (5.8 KiB)
Quality: not computed
Version assembly_MT_cambridge from 14 November 2023
kmMyxGlut1.MT.20231114.fasta.gz (5.8 KiB)
Quality: not computed
Data Use Policy
Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.