Glossophaga mutica
Merriam's long-tongued bat
Included in the VGP and BAT1K.
- S3 File Index -- S3 Interactive Viewer -- NCBI Taxonomy Browser -
metadata.yaml (view) (edit on github) |
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No image
Raw Data by Technology
Datatype | Individual | Bases | Coverage | Bytes | Access |
---|---|---|---|---|---|
PacBio HiFi (.fq) | mGloMut1 | 77.22 Gbp | 31.71x | 55.5 GiB | |
Arima | mGloMut1 | 146.90 Gbp | 60.32x | 79.7 GiB |
Bases and Coverage are approximate.
Coverage based on genome size 2.44 Gbp.
Last upload on 5 December 2023.
Coverage based on genome size 2.44 Gbp.
Last upload on 5 December 2023.
Raw Data by Individual
Individual | Datatype | Bases | Coverage | Bytes | Access |
---|---|---|---|---|---|
mGloMut1 | PacBio HiFi (.fq) | 77.22 Gbp | 31.71x | 55.5 GiB | |
Arima | 146.90 Gbp | 60.32x | 79.7 GiB |
Bases and Coverage are approximate.
Coverage based on genome size 2.44 Gbp.
Last upload on 5 December 2023.
Coverage based on genome size 2.44 Gbp.
Last upload on 5 December 2023.
Assemblies
Individual 1 Haplotype 1 Assembly
Version assembly_curated from 5 December 2023
mGloMut1.HiC.hap1.decontam.20231205.fasta.gz (586.9 MiB)
Quality: not computed
Version assembly_curated from 5 December 2023
mGloMut1.HiC.hap1.decontam.20231205.fasta.gz (586.9 MiB)
Quality: not computed
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 1 | 219.48 Mbp | 1 | 224.30 Mbp |
20 | 3 | 167.70 Mbp | 2 | 223.83 Mbp |
30 | 4 | 143.34 Mbp | 3 | 219.48 Mbp |
40 | 6 | 89.28 Mbp | 4 | 213.30 Mbp |
50 | 8 | 77.03 Mbp | 6 | 169.73 Mbp |
60 | 11 | 60.44 Mbp | 7 | 143.34 Mbp |
70 | 15 | 55.08 Mbp | 9 | 116.65 Mbp |
80 | 20 | 36.18 Mbp | 10 | 115.37 Mbp |
90 | 29 | 18.09 Mbp | 13 | 66.63 Mbp |
100 | 127 | 1.87 Kbp | 91 | 1.87 Kbp |
1.000x | 127 | 2.16 Gbp | 91 | 2.16 Gbp |
NG based on genome size 2.44 Gbp.
Individual 1 Haplotype 2 Assembly
Version assembly_curated from 5 December 2023
mGloMut1.HiC.hap2.decontam.20231205.fasta.gz (586.1 MiB)
Quality: not computed
Version assembly_curated from 5 December 2023
mGloMut1.HiC.hap2.decontam.20231205.fasta.gz (586.1 MiB)
Quality: not computed
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 2 | 131.90 Mbp | 1 | 227.85 Mbp |
20 | 3 | 124.33 Mbp | 2 | 222.90 Mbp |
30 | 5 | 106.71 Mbp | 3 | 217.72 Mbp |
40 | 7 | 102.56 Mbp | 4 | 213.11 Mbp |
50 | 10 | 72.10 Mbp | 6 | 169.57 Mbp |
60 | 13 | 56.85 Mbp | 7 | 143.03 Mbp |
70 | 18 | 46.98 Mbp | 9 | 116.23 Mbp |
80 | 23 | 36.32 Mbp | 10 | 115.28 Mbp |
90 | 31 | 21.01 Mbp | 12 | 97.15 Mbp |
100 | 112 | 1.87 Kbp | 75 | 1.87 Kbp |
1.000x | 112 | 2.16 Gbp | 75 | 2.16 Gbp |
NG based on genome size 2.44 Gbp.
Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 13 September 2023
mGloMut1.MT.20230913.fasta.gz (5.3 KiB)
Quality: not computed
Version assembly_MT_rockefeller from 13 September 2023
mGloMut1.MT.20230913.fasta.gz (5.3 KiB)
Quality: not computed
Assembly Metadata
Data Use Policy
Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.