Aythya fuligula
tufted duck
Included in the VGP.
- S3 File Index -- S3 Interactive Viewer -- NCBI Taxonomy Browser -
Resource | Primary Assembly | Alternate Assembly |
---|---|---|
GenBank | bAytFul2: GCA_009819795.1 | bAytFul2: GCA_009819845.1 |
ENA | bAytFul2: GCA_009819795.1 | bAytFul2: GCA_009819845.1 |
UCSC Genome Browser | bAytFul2: GCA_009819795.1 | bAytFul2: GCA_009819845.1 |
metadata.yaml (view) (edit on github) |
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CC BY-SA 3.0 Charles J Sharp (wikimedia)
Raw Data by Technology
Bases and Coverage are approximate.
Coverage based on genome size 1.20 Gbp.
Last upload on 8 March 2024.
Coverage based on genome size 1.20 Gbp.
Last upload on 8 March 2024.
Raw Data by Individual
Bases and Coverage are approximate.
Coverage based on genome size 1.20 Gbp.
Last upload on 8 March 2024.
Coverage based on genome size 1.20 Gbp.
Last upload on 8 March 2024.
Assemblies
Individual 2 Primary Assembly
Version assembly_curated from 20 September 2019
bAytFul2.pri.cur.20190920.fasta.gz (326.2 MiB)
Quality: 68.9 errors/Mb (QV=41.62)
Version assembly_curated from 20 September 2019
bAytFul2.pri.cur.20190920.fasta.gz (326.2 MiB)
Quality: 68.9 errors/Mb (QV=41.62)
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 1 | 50.92 Mbp | 0 | 207.02 Mbp |
20 | 4 | 37.75 Mbp | 1 | 159.65 Mbp |
30 | 9 | 22.59 Mbp | 1 | 159.65 Mbp |
40 | 14 | 21.34 Mbp | 2 | 119.49 Mbp |
50 | 21 | 16.30 Mbp | 4 | 76.88 Mbp |
60 | 29 | 13.04 Mbp | 6 | 39.51 Mbp |
70 | 40 | 9.77 Mbp | 9 | 26.50 Mbp |
80 | 54 | 6.04 Mbp | 15 | 18.74 Mbp |
90 | 92 | 1.33 Mbp | 24 | 7.51 Mbp |
100 | 0 | 0 | ||
0.931x | 267 | 1.12 Gbp | 104 | 1.13 Gbp |
NG based on genome size 1.20 Gbp.
Individual 2 Alternate Assembly
Version assembly_curated from 20 September 2019
bAytFul2.alt.cur.20190920.fasta.gz (298.1 MiB)
Quality: not computed
Version assembly_curated from 20 September 2019
bAytFul2.alt.cur.20190920.fasta.gz (298.1 MiB)
Quality: not computed
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 8 | 11.21 Mbp | 8 | 11.21 Mbp |
20 | 22 | 7.99 Mbp | 22 | 7.99 Mbp |
30 | 39 | 6.17 Mbp | 39 | 6.17 Mbp |
40 | 62 | 4.64 Mbp | 62 | 4.64 Mbp |
50 | 90 | 3.65 Mbp | 90 | 3.65 Mbp |
60 | 130 | 2.56 Mbp | 130 | 2.56 Mbp |
70 | 189 | 1.63 Mbp | 189 | 1.63 Mbp |
80 | 326 | 459.52 Kbp | 326 | 459.52 Kbp |
90 | 0 | 0 | ||
100 | 0 | 0 | ||
0.845x | 781 | 1.01 Gbp | 780 | 1.01 Gbp |
NG based on genome size 1.20 Gbp.
Data Use Policy
Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.