Myotis nesopolus

Curaçao myotis

Included in the VGP and BAT1K.

- S3 File Index -- S3 Interactive Viewer -- NCBI Taxonomy Browser -


metadata.yaml (view) (edit on github)
species:
  short_name: mMyoNes
  name: Myotis nesopolus
  taxon_id: 1163727
  common_name: Curaçao myotis
  order:
    name: Chiroptera
  family:
    name: Vespertilionidae
  individuals:
  - mMyoNes1
  genome_size: 2210280000
  genome_size_method: GoaT
  project: [ vgp , bat1k ]
No image
Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio HiFi (.fq) mMyoNes1 94.01 Gbp 42.53x 80.8 GiB
PacBio HiFi (.bam) mMyoNes1 94.27 Gbp 42.65x 338.1 GiB
Arima mMyoNes1 152.02 Gbp 68.78x 63.9 GiB
Bases and Coverage are approximate.
Coverage based on genome size 2.21 Gbp.
Last upload on 18 February 2024.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
mMyoNes1 PacBio HiFi (.fq) 94.01 Gbp 42.53x 80.8 GiB
PacBio HiFi (.bam) 94.27 Gbp 42.65x 338.1 GiB
Arima 152.02 Gbp 68.78x 63.9 GiB
Bases and Coverage are approximate.
Coverage based on genome size 2.21 Gbp.
Last upload on 18 February 2024.
Assemblies
Individual 1 Haplotype 1 Assembly
Version assembly_vgp_HiC_2.0 from 23 February 2024
mMyoNes1.HiC.hap1.20240223.fasta.gz (619.2 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 2 113.85 Mbp 1 242.75 Mbp
20 4 85.46 Mbp 2 221.29 Mbp
30 7 74.05 Mbp 3 220.52 Mbp
40 10 67.32 Mbp 5 113.01 Mbp
50 14 51.47 Mbp 7 96.71 Mbp
60 19 46.59 Mbp 10 85.85 Mbp
70 24 36.74 Mbp 12 75.15 Mbp
80 32 18.32 Mbp 16 59.94 Mbp
90 58 5.14 Mbp 20 48.32 Mbp
100 359 15.72 Kbp 238 15.72 Kbp
1.000x 359 2.20 Gbp 238 2.20 Gbp
NG based on genome size 2.21 Gbp.
Individual 1 Haplotype 2 Assembly
Version assembly_vgp_HiC_2.0 from 23 February 2024
mMyoNes1.HiC.hap2.20240223.fasta.gz (576.1 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 2 100.41 Mbp 1 238.58 Mbp
20 4 83.56 Mbp 2 217.76 Mbp
30 7 70.82 Mbp 3 215.04 Mbp
40 10 59.21 Mbp 5 111.22 Mbp
50 14 48.85 Mbp 7 100.36 Mbp
60 18 40.63 Mbp 9 87.69 Mbp
70 24 29.90 Mbp 11 79.12 Mbp
80 33 14.43 Mbp 14 58.99 Mbp
90 61 3.63 Mbp 18 46.62 Mbp
100 345 17.17 Kbp 186 17.17 Kbp
1.000x 345 2.05 Gbp 186 2.05 Gbp
NG based on genome size 2.21 Gbp.
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.