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Raw Data by Technology
Datatype | Individual | Bases | Coverage | Bytes | Access |
---|---|---|---|---|---|
PacBio HiFi (.fq) | bMolAte1 | 64.13 Gbp | N/A | 27.6 GiB | |
PacBio HiFi (.bam) | bMolAte1 | 65.18 Gbp | N/A | 267.4 GiB | |
Arima | bMolAte1 | 54.97 Gbp | N/A | 29.1 GiB |
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 25 August 2023.
Coverage based on genome size .
Last upload on 25 August 2023.
Raw Data by Individual
Individual | Datatype | Bases | Coverage | Bytes | Access |
---|---|---|---|---|---|
bMolAte1 | PacBio HiFi (.fq) | 64.13 Gbp | N/A | 27.6 GiB | |
PacBio HiFi (.bam) | 65.18 Gbp | N/A | 267.4 GiB | ||
Arima | 54.97 Gbp | N/A | 29.1 GiB |
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 25 August 2023.
Coverage based on genome size .
Last upload on 25 August 2023.
Assemblies
Individual 1 Haplotype 1 Assembly
Version assembly_curated from 10 November 2023
bMolAte1.hap1.decontam.20231110.fasta.gz (319.4 MiB)
Quality: not computed
Version assembly_curated from 10 November 2023
bMolAte1.hap1.decontam.20231110.fasta.gz (319.4 MiB)
Quality: not computed
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 2 | 58.23 Mbp | 1 | 153.40 Mbp |
20 | 4 | 54.17 Mbp | 2 | 117.11 Mbp |
30 | 8 | 31.03 Mbp | 4 | 77.73 Mbp |
40 | 13 | 23.96 Mbp | 5 | 76.67 Mbp |
50 | 19 | 18.29 Mbp | 7 | 63.05 Mbp |
60 | 28 | 11.77 Mbp | 11 | 25.89 Mbp |
70 | 44 | 6.37 Mbp | 17 | 16.76 Mbp |
80 | 76 | 2.82 Mbp | 28 | 7.51 Mbp |
90 | 180 | 489.89 Kbp | 89 | 0.62 Mbp |
100 | 2546 | 4.49 Kbp | 2290 | 4.49 Kbp |
1.000x | 2546 | 1.30 Gbp | 2290 | 1.30 Gbp |
NG based on genome size .
Individual 1 Haplotype 2 Assembly
Version assembly_curated from 10 November 2023
bMolAte1.hap2.decontam.20231110.fasta.gz (288.7 MiB)
Quality: not computed
Version assembly_curated from 10 November 2023
bMolAte1.hap2.decontam.20231110.fasta.gz (288.7 MiB)
Quality: not computed
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 2 | 64.51 Mbp | 1 | 154.29 Mbp |
20 | 4 | 56.50 Mbp | 2 | 117.23 Mbp |
30 | 6 | 46.90 Mbp | 3 | 114.90 Mbp |
40 | 10 | 25.72 Mbp | 5 | 72.78 Mbp |
50 | 16 | 18.74 Mbp | 6 | 63.17 Mbp |
60 | 23 | 14.37 Mbp | 10 | 25.82 Mbp |
70 | 33 | 8.44 Mbp | 15 | 18.74 Mbp |
80 | 55 | 3.24 Mbp | 25 | 7.53 Mbp |
90 | 146 | 499.32 Kbp | 80 | 0.69 Mbp |
100 | 2034 | 7.90 Kbp | 1910 | 7.90 Kbp |
1.000x | 2034 | 1.18 Gbp | 1910 | 1.18 Gbp |
NG based on genome size .
Data Use Policy
Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.