Phaethornis superciliosus

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Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio CLR (.fq) bPhaSup1 118.46 Gbp N/A 33.0 GiB
10x bPhaSup1 81.47 Gbp N/A 37.5 GiB
Arima bPhaSup1 178.79 Gbp N/A 87.4 GiB
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 12 May 2023.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
bPhaSup1 PacBio CLR (.fq) 118.46 Gbp N/A 33.0 GiB
10x 81.47 Gbp N/A 37.5 GiB
Arima 178.79 Gbp N/A 87.4 GiB
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 12 May 2023.
Assemblies
Individual 1 Haplotype 1 Assembly
Version assembly_curated from 23 June 2023
bPhaSup1.hap1.cur.20230623.fasta.gz (295.4 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 1 123.32 Mbp 1 196.61 Mbp
20 2 88.47 Mbp 2 149.69 Mbp
30 4 70.62 Mbp 2 149.69 Mbp
40 5 55.98 Mbp 3 114.54 Mbp
50 8 35.19 Mbp 4 72.67 Mbp
60 11 22.99 Mbp 6 43.27 Mbp
70 16 18.72 Mbp 9 30.56 Mbp
80 22 13.33 Mbp 13 21.16 Mbp
90 32 6.06 Mbp 19 14.86 Mbp
100 205 587 bp 65 6.94 Kbp
1.000x 205 1.02 Gbp 65 1.02 Gbp
NG based on genome size .
Individual 1 Haplotype 2 Assembly
Version assembly_curated from 23 June 2023
bPhaSup1.hap2.decon.20230623.fasta.gz (318.5 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 2 55.98 Mbp 2 55.98 Mbp
20 4 40.33 Mbp 4 40.33 Mbp
30 8 22.99 Mbp 8 22.99 Mbp
40 12 21.16 Mbp 12 21.16 Mbp
50 17 18.94 Mbp 17 18.94 Mbp
60 23 15.64 Mbp 23 15.64 Mbp
70 31 12.13 Mbp 31 12.13 Mbp
80 40 9.18 Mbp 40 9.18 Mbp
90 57 3.58 Mbp 57 3.58 Mbp
100 230 3.60 Kbp 230 3.60 Kbp
1.000x 230 1.01 Gbp 230 1.01 Gbp
NG based on genome size .
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.