Molothrus ater

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Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio HiFi (.fq) bMolAte1 64.13 Gbp N/A 27.6 GiB
PacBio HiFi (.bam) bMolAte1 65.18 Gbp N/A 267.4 GiB
Arima bMolAte1 54.97 Gbp N/A 29.1 GiB
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 25 August 2023.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
bMolAte1 PacBio HiFi (.fq) 64.13 Gbp N/A 27.6 GiB
PacBio HiFi (.bam) 65.18 Gbp N/A 267.4 GiB
Arima 54.97 Gbp N/A 29.1 GiB
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 25 August 2023.
Assemblies
Individual 1 Haplotype 1 Assembly
Version assembly_curated from 10 November 2023
bMolAte1.hap1.decontam.20231110.fasta.gz (319.4 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 2 58.23 Mbp 1 153.40 Mbp
20 4 54.17 Mbp 2 117.11 Mbp
30 8 31.03 Mbp 4 77.73 Mbp
40 13 23.96 Mbp 5 76.67 Mbp
50 19 18.29 Mbp 7 63.05 Mbp
60 28 11.77 Mbp 11 25.89 Mbp
70 44 6.37 Mbp 17 16.76 Mbp
80 76 2.82 Mbp 28 7.51 Mbp
90 180 489.89 Kbp 89 0.62 Mbp
100 2546 4.49 Kbp 2290 4.49 Kbp
1.000x 2546 1.30 Gbp 2290 1.30 Gbp
NG based on genome size .
Individual 1 Haplotype 2 Assembly
Version assembly_curated from 10 November 2023
bMolAte1.hap2.decontam.20231110.fasta.gz (288.7 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 2 64.51 Mbp 1 154.29 Mbp
20 4 56.50 Mbp 2 117.23 Mbp
30 6 46.90 Mbp 3 114.90 Mbp
40 10 25.72 Mbp 5 72.78 Mbp
50 16 18.74 Mbp 6 63.17 Mbp
60 23 14.37 Mbp 10 25.82 Mbp
70 33 8.44 Mbp 15 18.74 Mbp
80 55 3.24 Mbp 25 7.53 Mbp
90 146 499.32 Kbp 80 0.69 Mbp
100 2034 7.90 Kbp 1910 7.90 Kbp
1.000x 2034 1.18 Gbp 1910 1.18 Gbp
NG based on genome size .
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.