Lophostoma evotis

Davis' round-eared bat

Included in the VGP and BAT1K.

- S3 File Index -- S3 Interactive Viewer -- NCBI Taxonomy Browser -


metadata.yaml (view) (edit on github)
species:
  short_name: mLopEvo
  name: Lophostoma evotis
  taxon_id: 574022
  common_name: Davis' round-eared bat
  order:
    name: Chiroptera
  family:
    name: Phyllostomidae
  individuals:
  - mLopEvo1
  genome_size: 2454780000
  genome_size_method: GoaT
  project: [ vgp , bat1k ]
No image
Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio HiFi (.fq) mLopEvo1 105.59 Gbp 43.01x 83.4 GiB
Dovetail Genomics mLopEvo1 188.57 Gbp 76.82x 108.5 GiB
Bases and Coverage are approximate.
Coverage based on genome size 2.45 Gbp.
Last upload on 27 October 2023.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
mLopEvo1 PacBio HiFi (.fq) 105.59 Gbp 43.01x 83.4 GiB
Dovetail Genomics 188.57 Gbp 76.82x 108.5 GiB
Bases and Coverage are approximate.
Coverage based on genome size 2.45 Gbp.
Last upload on 27 October 2023.
Assemblies
Individual 1 Haplotype 1 Assembly
Version assembly_curated from 10 November 2023
mLopEvo1.hap1.decontam.20231110.fasta.gz (610.4 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 2 124.90 Mbp 2 225.12 Mbp
20 5 88.37 Mbp 3 220.70 Mbp
30 8 76.04 Mbp 4 216.45 Mbp
40 11 60.72 Mbp 5 180.43 Mbp
50 16 53.22 Mbp 6 172.89 Mbp
60 21 41.98 Mbp 8 117.25 Mbp
70 27 32.04 Mbp 10 98.07 Mbp
80 36 19.20 Mbp 13 67.40 Mbp
90 65 3.73 Mbp 22 6.13 Mbp
100 462 10.90 Kbp 399 10.90 Kbp
1.000x 462 2.43 Gbp 399 2.43 Gbp
NG based on genome size 2.45 Gbp.
Individual 1 Haplotype 2 Assembly
Version assembly_curated from 10 November 2023
mLopEvo1.hap2.decontam.20231110.fasta.gz (571.8 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 2 130.83 Mbp 1 223.68 Mbp
20 4 108.07 Mbp 2 219.75 Mbp
30 6 84.34 Mbp 3 216.51 Mbp
40 9 77.41 Mbp 4 216.35 Mbp
50 12 61.01 Mbp 6 170.64 Mbp
60 16 48.27 Mbp 7 145.66 Mbp
70 21 38.94 Mbp 9 108.68 Mbp
80 27 29.49 Mbp 11 96.81 Mbp
90 40 12.85 Mbp 14 50.19 Mbp
100 246 23.94 Kbp 186 23.94 Kbp
1.000x 246 2.16 Gbp 186 2.16 Gbp
NG based on genome size 2.45 Gbp.
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.