Labrus mixtus

cuckoo wrasse

Included in the VGP.

- S3 File Index -- S3 Interactive Viewer -- NCBI Taxonomy Browser -


metadata.yaml (view) (edit on github)
species:
  short_name: fLabMix
  name: Labrus mixtus
  taxon_id: 508554
  common_name: cuckoo wrasse
  order:
    name: Perciformes
  family:
    name: Labridae
  individuals:
    - short_name: fLabMix1
      biosample_id: SAMEA111562155
      sex: male
  genome_size: 1408320000
  genome_size_method: GoaT
  project: [ vgp ]
No image
Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio HiFi (.bam) fLabMix1 63.13 Gbp 44.83x 106.7 GiB
Arima fLabMix1 95.03 Gbp 67.48x 29.5 GiB
Bases and Coverage are approximate.
Coverage based on genome size 1.41 Gbp.
Last upload on 13 June 2023.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
fLabMix1 PacBio HiFi (.bam) 63.13 Gbp 44.83x 106.7 GiB
Arima 95.03 Gbp 67.48x 29.5 GiB
Bases and Coverage are approximate.
Coverage based on genome size 1.41 Gbp.
Last upload on 13 June 2023.
Assemblies
Individual 1 Primary Assembly
Version assembly_curated from 2 November 2023
fLabMix1.pri.cur.20231102.fasta.gz (201.1 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 18 5.86 Mbp 4 33.82 Mbp
20 47 3.85 Mbp 9 31.24 Mbp
30 96 2.31 Mbp 13 29.66 Mbp
40 177 1.24 Mbp 18 26.31 Mbp
50 417 216.97 Kbp 29 1.14 Mbp
60 0 0
70 0 0
80 0 0
90 0 0
100 0 0
0.526x 895 0.74 Gbp 325 0.74 Gbp
NG based on genome size 1.41 Gbp.
Individual 1 Alternate Assembly
Version assembly_curated from 2 November 2023
fLabMix1.alt.cur.20231102.fasta.gz (197.0 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 63 1.64 Mbp 63 1.64 Mbp
20 181 0.96 Mbp 181 0.96 Mbp
30 370 0.57 Mbp 370 0.57 Mbp
40 718 274.77 Kbp 718 274.77 Kbp
50 0 0
60 0 0
70 0 0
80 0 0
90 0 0
100 0 0
0.498x 2462 0.70 Gbp 2462 0.70 Gbp
NG based on genome size 1.41 Gbp.
Individual 1 Mitochondrial Assembly
Version assembly_MT_cambridge from 23 June 2023
fLabMix1.MT.20230623.fasta.gz (5.3 KiB)

Quality: not computed
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.