Gouania willdenowi

blunt-snouted clingfish

Included in the VGP.

- S3 File Index -- S3 Interactive Viewer -- NCBI Taxonomy Browser -


Resource Primary Assembly Alternate Assembly
GenBank fGouWil2: GCA_900634775.2 fGouWil2: GCA_900650505.1
ENA fGouWil2: GCA_900634775.2 fGouWil2: GCA_900650505.1
UCSC Genome Browser fGouWil2: GCA_900634775.2 fGouWil2: GCA_900650505.1

metadata.yaml (view) (edit on github)
species:
  short_name: fGouWil
  name: Gouania willdenowi
  taxon_id: 441366
  common_name: blunt-snouted clingfish
  order:
    name: Blenniiformes
  family:
    name: Gobiesocidae
  individuals:
    - short_name: fGouWil2
  genome_size: 1182215999
  genome_size_method:
  project: [ vgp ]
Copyright Maximillian Wagner, used with permission
Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio CLR fGouWil2 56.70 Gbp 47.96x 100.7 GiB
10x fGouWil2 107.78 Gbp 91.17x 75.2 GiB
Bionano fGouWil2 N/A 241.52x 275.6 MiB
Arima fGouWil2 77.88 Gbp 65.87x 38.7 GiB
Bases and Coverage are approximate.
Coverage based on genome size 1.18 Gbp.
Last upload on 12 April 2018.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
fGouWil2 PacBio CLR 56.70 Gbp 47.96x 100.7 GiB
10x 107.78 Gbp 91.17x 75.2 GiB
Bionano N/A 241.52x 275.6 MiB
Arima 77.88 Gbp 65.87x 38.7 GiB
Bases and Coverage are approximate.
Coverage based on genome size 1.18 Gbp.
Last upload on 12 April 2018.
Assemblies
Individual 2 Primary Assembly
Version assembly_curated from 16 November 2018
fGouWil2.pri.cur.20181116.fasta.gz (265.9 MiB)

Quality: 136.9 errors/Mb (QV=38.64)

Contigs Scaffolds
NG LG Len LG Len
10 14 5.65 Mbp 1 46.06 Mbp
20 41 3.46 Mbp 4 43.80 Mbp
30 81 2.53 Mbp 7 42.80 Mbp
40 137 1.79 Mbp 10 38.98 Mbp
50 218 1.18 Mbp 13 36.80 Mbp
60 341 0.79 Mbp 16 33.48 Mbp
70 566 318.01 Kbp 20 26.98 Mbp
80 0 0
90 0 0
100 0 0
0.781x 1601 0.92 Gbp 441 0.94 Gbp
NG based on genome size 1.18 Gbp.
Individual 2 Alternate Assembly
Version assembly_curated from 16 November 2018
fGouWil2.alt.cur.20181116.fasta.gz (17.8 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 0 0
20 0 0
30 0 0
40 0 0
50 0 0
60 0 0
70 0 0
80 0 0
90 0 0
100 0 0
0.053x 748 62.95 Mbp 748 62.95 Mbp
NG based on genome size 1.18 Gbp.
Individual 2 Mitochondrial Assembly
Version assembly_MT_rockefeller from 2 October 2019
fGouWil2.MT.20191002.fasta.gz (5.3 KiB)

Quality: not computed
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.