Falco punctatus

Mauritius kestrel

Included in the VGP.

- S3 File Index -- S3 Interactive Viewer -- NCBI Taxonomy Browser -


metadata.yaml (view) (edit on github)
species:
  short_name: bFalPun
  name: Falco punctatus
  taxon_id: 148596
  common_name: Mauritius kestrel
  order:
    name: Falconiformes
  family:
    name: Falconidae
  individuals:
    - short_name: bFalPun1
      biosample_id: SAMEA14356472
      sex:
    - short_name: bFalPun2
      biosample_id: SAMEA14356473
      sex: female
  genome_size: 1403430000
  genome_size_method: GoaT
  project: [ vgp ]
No image
Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio HiFi (.bam) bFalPun1 42.72 Gbp 30.44x 115.6 GiB
bFalPun2 81.80 Gbp 58.28x 32.3 GiB
Arima bFalPun2 99.23 Gbp 70.70x 29.9 GiB
Bases and Coverage are approximate.
Coverage based on genome size 1.40 Gbp.
Last upload on 23 December 2023.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
bFalPun1 PacBio HiFi (.bam) 42.72 Gbp 30.44x 115.6 GiB
bFalPun2 PacBio HiFi (.bam) 81.80 Gbp 58.28x 32.3 GiB
Arima 99.23 Gbp 70.70x 29.9 GiB
Bases and Coverage are approximate.
Coverage based on genome size 1.40 Gbp.
Last upload on 23 December 2023.
Assemblies
Individual 1 Primary Assembly
Version assembly_curated from 10 August 2023
bFalPun1.pri.cur.20230810.fasta.gz (359.1 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 12 10.60 Mbp 2 122.36 Mbp
20 27 8.25 Mbp 3 122.35 Mbp
30 46 6.35 Mbp 4 116.53 Mbp
40 71 5.29 Mbp 5 92.39 Mbp
50 101 4.30 Mbp 7 86.51 Mbp
60 137 3.45 Mbp 9 65.51 Mbp
70 185 2.59 Mbp 11 43.09 Mbp
80 256 1.39 Mbp 16 24.25 Mbp
90 483 187.94 Kbp 113 238.00 Kbp
100 0 0
0.911x 723 1.28 Gbp 316 1.28 Gbp
NG based on genome size 1.40 Gbp.
Individual 1 Alternate Assembly
Version assembly_curated from 10 August 2023
bFalPun1.alt.cur.20230810.fasta.gz (107.7 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 211 427.58 Kbp 211 427.58 Kbp
20 719 182.76 Kbp 719 182.76 Kbp
30 0 0
40 0 0
50 0 0
60 0 0
70 0 0
80 0 0
90 0 0
100 0 0
0.278x 2259 390.58 Mbp 2259 390.58 Mbp
NG based on genome size 1.40 Gbp.
Individual 1 Mitochondrial Assembly
Version assembly_MT_cambridge from 28 March 2023
bFalPun1.MT.20230328.fasta.gz (5.4 KiB)

Quality: not computed
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.