Eptesicus furinalis

Argentine brown bat

Included in the VGP and BAT1K.

- S3 File Index -- S3 Interactive Viewer -- NCBI Taxonomy Browser -


metadata.yaml (view) (edit on github)
species:
  short_name: mEptFur
  name: Eptesicus furinalis
  taxon_id: 124746
  common_name: Argentine brown bat
  order:
    name: Chiroptera
  family:
    name: Vespertilionidae
  individuals:
  - mEptFur1
  genome_size: 2474340000
  genome_size_method: GoaT
  project: [ vgp , bat1k ]
No image
Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio HiFi (.fq) mEptFur1 111.70 Gbp 45.14x 82.0 GiB
Dovetail Genomics mEptFur1 170.22 Gbp 68.79x 94.5 GiB
Bases and Coverage are approximate.
Coverage based on genome size 2.47 Gbp.
Last upload on 24 October 2023.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
mEptFur1 PacBio HiFi (.fq) 111.70 Gbp 45.14x 82.0 GiB
Dovetail Genomics 170.22 Gbp 68.79x 94.5 GiB
Bases and Coverage are approximate.
Coverage based on genome size 2.47 Gbp.
Last upload on 24 October 2023.
Assemblies
Individual 1 Haplotype 1 Assembly
Version assembly_curated from 7 November 2023
mEptFur1.hap1.decontam.20231107.fasta.gz (561.2 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 3 97.47 Mbp 2 122.76 Mbp
20 5 88.20 Mbp 4 117.86 Mbp
30 7 81.44 Mbp 6 113.03 Mbp
40 11 59.60 Mbp 8 109.97 Mbp
50 14 55.41 Mbp 10 101.05 Mbp
60 19 47.62 Mbp 12 97.91 Mbp
70 24 37.41 Mbp 14 86.24 Mbp
80 30 24.70 Mbp 17 62.93 Mbp
90 50 5.13 Mbp 21 48.29 Mbp
100 312 13.70 Kbp 149 13.70 Kbp
1.000x 312 2.17 Gbp 149 2.17 Gbp
NG based on genome size 2.47 Gbp.
Individual 1 Haplotype 2 Assembly
Version assembly_curated from 7 November 2023
mEptFur1.hap2.decontam.20231107.fasta.gz (556.0 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 2 109.61 Mbp 2 122.29 Mbp
20 5 91.22 Mbp 4 117.19 Mbp
30 7 85.61 Mbp 6 113.04 Mbp
40 10 70.64 Mbp 8 108.42 Mbp
50 13 60.86 Mbp 9 107.65 Mbp
60 16 55.54 Mbp 12 96.10 Mbp
70 21 35.78 Mbp 14 85.44 Mbp
80 29 20.27 Mbp 17 62.93 Mbp
90 47 6.20 Mbp 20 54.28 Mbp
100 260 14.88 Kbp 93 14.88 Kbp
1.000x 260 2.11 Gbp 93 2.11 Gbp
NG based on genome size 2.47 Gbp.
Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 3 November 2023
mEptFur1.MT.20231103.fasta.gz (5.0 KiB)

Quality: not computed
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.