Blennius ocellaris

butterfly blenny

Included in the VGP.

- S3 File Index -- S3 Interactive Viewer -- NCBI Taxonomy Browser -


metadata.yaml (view) (edit on github)
species:
  short_name: fBleOce
  name: Blennius ocellaris
  taxon_id: 195075
  common_name: butterfly blenny
  order:
    name: Perciformes
  family:
    name: Blenniidae
  individuals:
    - short_name: fBleOce1
      biosample_id: SAMEA112788961
      sex:
  genome_size: 841080000
  genome_size_method: GoaT
  project: [ vgp ]
No image
Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio HiFi (.bam) fBleOce1 20.22 Gbp 24.04x 13.6 GiB
Arima fBleOce1 90.39 Gbp 107.47x 27.7 GiB
Bases and Coverage are approximate.
Coverage based on genome size 0.84 Gbp.
Last upload on 13 August 2023.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
fBleOce1 PacBio HiFi (.bam) 20.22 Gbp 24.04x 13.6 GiB
Arima 90.39 Gbp 107.47x 27.7 GiB
Bases and Coverage are approximate.
Coverage based on genome size 0.84 Gbp.
Last upload on 13 August 2023.
Assemblies
Individual 1 Primary Assembly
Version assembly_curated from 2 September 2023
fBleOce1.pri.cur.20230902.fasta.gz (198.4 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 27 2.65 Mbp 3 33.95 Mbp
20 65 1.89 Mbp 5 31.33 Mbp
30 116 1.49 Mbp 8 30.31 Mbp
40 178 1.20 Mbp 11 29.78 Mbp
50 260 0.88 Mbp 14 28.32 Mbp
60 377 0.59 Mbp 17 26.57 Mbp
70 569 315.67 Kbp 20 23.95 Mbp
80 1005 111.12 Kbp 24 16.46 Mbp
90 0 0
100 0 0
0.866x 2150 0.73 Gbp 525 0.73 Gbp
NG based on genome size 0.84 Gbp.
Individual 1 Alternate Assembly
Version assembly_curated from 2 September 2023
fBleOce1.alt.cur.20230902.fasta.gz (187.5 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 91 0.67 Mbp 91 0.67 Mbp
20 248 442.36 Kbp 248 442.36 Kbp
30 477 313.47 Kbp 477 313.47 Kbp
40 792 232.54 Kbp 792 232.54 Kbp
50 1227 159.67 Kbp 1227 159.67 Kbp
60 1891 101.65 Kbp 1891 101.65 Kbp
70 2995 56.44 Kbp 2995 56.44 Kbp
80 5585 15.70 Kbp 5585 15.70 Kbp
90 0 0
100 0 0
0.803x 5820 0.68 Gbp 5820 0.68 Gbp
NG based on genome size 0.84 Gbp.
Individual 1 Mitochondrial Assembly
Version assembly_MT_cambridge from 14 August 2023
fBleOce1.MT.20230814.fasta.gz (5.3 KiB)

Quality: not computed
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.