Anodorhynchus hyacinthinus

- S3 File Index -- S3 Interactive Viewer -- NCBI Taxonomy Browser -


No image
Raw Data by Technology
Datatype Individual Bases Coverage Bytes Access
PacBio HiFi (.fq) bAnoHya1 50.29 Gbp N/A 28.9 GiB
PacBio HiFi (.bam) bAnoHya1 376.35 Gbp N/A 216.0 GiB
Arima bAnoHya1 68.79 Gbp N/A 36.6 GiB
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 20 March 2024.
Raw Data by Individual
Individual Datatype Bases Coverage Bytes Access
bAnoHya1 PacBio HiFi (.fq) 50.29 Gbp N/A 28.9 GiB
PacBio HiFi (.bam) 376.35 Gbp N/A 216.0 GiB
Arima 68.79 Gbp N/A 36.6 GiB
Bases and Coverage are approximate.
Coverage based on genome size .
Last upload on 20 March 2024.
Assemblies
Individual 1 Haplotype 1 Assembly
Version assembly_curated from 21 December 2023
bAnoHya1.HiC.hap1.decontam.20231221.fasta.gz (290.3 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 2 54.47 Mbp 1 167.34 Mbp
20 5 36.95 Mbp 2 162.36 Mbp
30 8 33.72 Mbp 3 129.35 Mbp
40 12 30.00 Mbp 3 129.35 Mbp
50 16 23.42 Mbp 4 124.19 Mbp
60 22 15.33 Mbp 5 96.24 Mbp
70 30 10.72 Mbp 7 65.26 Mbp
80 43 5.96 Mbp 9 27.57 Mbp
90 71 2.67 Mbp 15 8.68 Mbp
100 553 14.23 Kbp 418 14.23 Kbp
1.000x 553 1.11 Gbp 418 1.11 Gbp
NG based on genome size .
Individual 1 Haplotype 2 Assembly
Version assembly_curated from 21 December 2023
bAnoHya1.HiC.hap2.decontam.20231221.fasta.gz (326.8 MiB)

Quality: not computed

Contigs Scaffolds
NG LG Len LG Len
10 3 57.03 Mbp 1 167.23 Mbp
20 6 32.44 Mbp 2 162.85 Mbp
30 10 30.14 Mbp 3 129.99 Mbp
40 15 22.30 Mbp 4 124.67 Mbp
50 22 17.96 Mbp 5 106.27 Mbp
60 30 14.39 Mbp 6 96.60 Mbp
70 42 7.95 Mbp 8 66.23 Mbp
80 64 4.89 Mbp 10 45.77 Mbp
90 105 1.89 Mbp 23 6.31 Mbp
100 627 14.29 Kbp 449 14.29 Kbp
1.000x 627 1.30 Gbp 449 1.30 Gbp
NG based on genome size .
Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 5 January 2024
bAnoHya1.MT.20240105.fasta.gz (5.8 KiB)

Quality: not computed
Data Use Policy

Samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact Erich D. Jarvis, ejarvis@rockefeller.edu, with any questions.